Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube4bQ9ES00 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Ube4bQ9ES00 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Gm10033-202ENSMUST00000211874 928 ntBASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Gm18671-201ENSMUST00000214826 683 ntBASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Gm5874-201ENSMUST00000096101 508 ntBASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ube4bQ9ES00 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Gm42642-201ENSMUST00000200683 355 ntBASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4bQ9ES00 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ube4bQ9ES00 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ube4bQ9ES00 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4bQ9ES00 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4bQ9ES00 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4bQ9ES00 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4bQ9ES00 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4bQ9ES00 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ube4bQ9ES00 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.14■□□□□ 0.17
Ube4bQ9ES00 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4bQ9ES00 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4bQ9ES00 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4bQ9ES00 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4bQ9ES00 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4bQ9ES00 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4bQ9ES00 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ube4bQ9ES00 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.14■□□□□ 0.17
Ube4bQ9ES00 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4bQ9ES00 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4bQ9ES00 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4bQ9ES00 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4bQ9ES00 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms