Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rtp4Q9ER80 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rtp4Q9ER80 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rtp4Q9ER80 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rtp4Q9ER80 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Rtp4Q9ER80 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rtp4Q9ER80 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rtp4Q9ER80 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtp4Q9ER80 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtp4Q9ER80 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.7■□□□□ 0.1
Rtp4Q9ER80 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rtp4Q9ER80 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtp4Q9ER80 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rtp4Q9ER80 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rtp4Q9ER80 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtp4Q9ER80 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rtp4Q9ER80 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.7■□□□□ 0.1
Rtp4Q9ER80 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Rtp4Q9ER80 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Rtp4Q9ER80 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rtp4Q9ER80 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Gm9731-201ENSMUST00000209480 747 ntBASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rtp4Q9ER80 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.66■□□□□ 0.1
Rtp4Q9ER80 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rtp4Q9ER80 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Rtp4Q9ER80 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rtp4Q9ER80 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtp4Q9ER80 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtp4Q9ER80 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rtp4Q9ER80 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms