Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 Gm27000-201ENSMUST00000182943 842 ntBASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Col4a3bpQ9EQG9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a3bpQ9EQG9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a3bpQ9EQG9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.21■□□□□ 0.67
Col4a3bpQ9EQG9 Gm7638-201ENSMUST00000121348 967 ntBASIC19.21■□□□□ 0.67
Col4a3bpQ9EQG9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a3bpQ9EQG9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a3bpQ9EQG9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a3bpQ9EQG9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a3bpQ9EQG9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a3bpQ9EQG9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.21■□□□□ 0.67
Col4a3bpQ9EQG9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a3bpQ9EQG9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a3bpQ9EQG9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a3bpQ9EQG9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Col4a3bpQ9EQG9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Col4a3bpQ9EQG9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Gm6433-201ENSMUST00000118634 875 ntBASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Gm11539-201ENSMUST00000119837 557 ntBASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Gm13436-201ENSMUST00000120418 567 ntBASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Gm38027-201ENSMUST00000192315 235 ntBASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Gm9987-201ENSMUST00000069768 567 ntBASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a3bpQ9EQG9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Col4a3bpQ9EQG9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a3bpQ9EQG9 Gm13559-201ENSMUST00000120476 863 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms