Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Gm13186-201ENSMUST00000118031 316 ntBASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Gm28033-201ENSMUST00000184224 96 ntBASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Gm18669-201ENSMUST00000216049 778 ntBASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rsph3bQ9DA80 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Mir3081-201ENSMUST00000175305 84 ntBASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Phf7-203ENSMUST00000226565 1971 ntBASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rsph3bQ9DA80 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Gm8969-201ENSMUST00000199694 526 ntBASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph3bQ9DA80 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Gm17971-201ENSMUST00000190239 806 ntBASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph3bQ9DA80 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Rsph3bQ9DA80 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph3bQ9DA80 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph3bQ9DA80 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.33■□□□□ 0.53
Rsph3bQ9DA80 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph3bQ9DA80 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph3bQ9DA80 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rsph3bQ9DA80 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.33■□□□□ 0.52
Rsph3bQ9DA80 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rsph3bQ9DA80 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms