Protein–RNA interactions for Protein: Q9D4H7

Lonrf3, LON peptidase N-terminal domain and RING finger protein 3, mousemouse

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf3Q9D4H7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lonrf3Q9D4H7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lonrf3Q9D4H7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lonrf3Q9D4H7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lonrf3Q9D4H7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Lonrf3Q9D4H7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lonrf3Q9D4H7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Lonrf3Q9D4H7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Lonrf3Q9D4H7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf3Q9D4H7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Gm11336-201ENSMUST00000118168 334 ntBASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Gm6623-201ENSMUST00000173570 544 ntBASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Lonrf3Q9D4H7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lonrf3Q9D4H7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lonrf3Q9D4H7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lonrf3Q9D4H7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lonrf3Q9D4H7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lonrf3Q9D4H7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Lonrf3Q9D4H7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lonrf3Q9D4H7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lonrf3Q9D4H7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lonrf3Q9D4H7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lonrf3Q9D4H7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lonrf3Q9D4H7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Lonrf3Q9D4H7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lonrf3Q9D4H7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lonrf3Q9D4H7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lonrf3Q9D4H7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Lonrf3Q9D4H7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lonrf3Q9D4H7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Lonrf3Q9D4H7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lonrf3Q9D4H7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lonrf3Q9D4H7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Lonrf3Q9D4H7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lonrf3Q9D4H7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lonrf3Q9D4H7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lonrf3Q9D4H7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lonrf3Q9D4H7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lonrf3Q9D4H7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lonrf3Q9D4H7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Lonrf3Q9D4H7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Lonrf3Q9D4H7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Lonrf3Q9D4H7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.39■□□□□ 0.7
Lonrf3Q9D4H7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lonrf3Q9D4H7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.39■□□□□ 0.69
Lonrf3Q9D4H7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lonrf3Q9D4H7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lonrf3Q9D4H7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lonrf3Q9D4H7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lonrf3Q9D4H7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Lonrf3Q9D4H7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lonrf3Q9D4H7 Gm14859-201ENSMUST00000117752 357 ntBASIC19.39■□□□□ 0.69
Lonrf3Q9D4H7 Gm27704-201ENSMUST00000185094 107 ntBASIC19.39■□□□□ 0.69
Lonrf3Q9D4H7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lonrf3Q9D4H7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lonrf3Q9D4H7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lonrf3Q9D4H7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.39■□□□□ 0.69
Lonrf3Q9D4H7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms