Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Trim42Q9D2H5 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim42Q9D2H5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim42Q9D2H5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim42Q9D2H5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim42Q9D2H5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim42Q9D2H5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim42Q9D2H5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim42Q9D2H5 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.77■□□□□ 0.28
Trim42Q9D2H5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim42Q9D2H5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim42Q9D2H5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trim42Q9D2H5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim42Q9D2H5 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.77■□□□□ 0.28
Trim42Q9D2H5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim42Q9D2H5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim42Q9D2H5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim42Q9D2H5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim42Q9D2H5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim42Q9D2H5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim42Q9D2H5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.77■□□□□ 0.27
Trim42Q9D2H5 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim42Q9D2H5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim42Q9D2H5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim42Q9D2H5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim42Q9D2H5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Gm44549-201ENSMUST00000208351 577 ntBASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim42Q9D2H5 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim42Q9D2H5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Gm7291-201ENSMUST00000199147 382 ntBASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Gm6365-201ENSMUST00000054711 744 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms