Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd1Q9D0E3 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.94■□□□□ 0.46
Lysmd1Q9D0E3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd1Q9D0E3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd1Q9D0E3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd1Q9D0E3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Lysmd1Q9D0E3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Lysmd1Q9D0E3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd1Q9D0E3 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Gm27300-201ENSMUST00000184085 97 ntBASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Gm27335-201ENSMUST00000184758 97 ntBASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Gm2423-201ENSMUST00000074863 733 ntBASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.92■□□□□ 0.46
Lysmd1Q9D0E3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd1Q9D0E3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Lysmd1Q9D0E3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd1Q9D0E3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd1Q9D0E3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd1Q9D0E3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.91■□□□□ 0.46
Lysmd1Q9D0E3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd1Q9D0E3 Gm25857-201ENSMUST00000082788 129 ntBASIC17.91■□□□□ 0.46
Lysmd1Q9D0E3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd1Q9D0E3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd1Q9D0E3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd1Q9D0E3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Lysmd1Q9D0E3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lysmd1Q9D0E3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lysmd1Q9D0E3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lysmd1Q9D0E3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lysmd1Q9D0E3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC17.9■□□□□ 0.46
Lysmd1Q9D0E3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lysmd1Q9D0E3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Lysmd1Q9D0E3 Gm43474-201ENSMUST00000196415 774 ntBASIC17.9■□□□□ 0.46
Lysmd1Q9D0E3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Lysmd1Q9D0E3 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.9■□□□□ 0.46
Lysmd1Q9D0E3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lysmd1Q9D0E3 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.9■□□□□ 0.46
Lysmd1Q9D0E3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lysmd1Q9D0E3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lysmd1Q9D0E3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Lysmd1Q9D0E3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Lysmd1Q9D0E3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Lysmd1Q9D0E3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Lysmd1Q9D0E3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Lysmd1Q9D0E3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lysmd1Q9D0E3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Lysmd1Q9D0E3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.89■□□□□ 0.45
Lysmd1Q9D0E3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Lysmd1Q9D0E3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lysmd1Q9D0E3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.89■□□□□ 0.45
Lysmd1Q9D0E3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lysmd1Q9D0E3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Lysmd1Q9D0E3 Mir6420-201ENSMUST00000185032 102 ntBASIC17.89■□□□□ 0.45
Lysmd1Q9D0E3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.89■□□□□ 0.45
Lysmd1Q9D0E3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.89■□□□□ 0.45
Lysmd1Q9D0E3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Lysmd1Q9D0E3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lysmd1Q9D0E3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lysmd1Q9D0E3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lysmd1Q9D0E3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lysmd1Q9D0E3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lysmd1Q9D0E3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lysmd1Q9D0E3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lysmd1Q9D0E3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.88■□□□□ 0.45
Lysmd1Q9D0E3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms