Protein–RNA interactions for Protein: Q9D0C1

Rnf115, E3 ubiquitin-protein ligase RNF115, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf115Q9D0C1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf115Q9D0C1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf115Q9D0C1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rnf115Q9D0C1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf115Q9D0C1 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.36□□□□□ -0.11
Rnf115Q9D0C1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.36□□□□□ -0.11
Rnf115Q9D0C1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf115Q9D0C1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf115Q9D0C1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rnf115Q9D0C1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf115Q9D0C1 Actl10-202ENSMUST00000226583 1501 ntBASIC14.36□□□□□ -0.11
Rnf115Q9D0C1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf115Q9D0C1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf115Q9D0C1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Rnf115Q9D0C1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf115Q9D0C1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Rnf115Q9D0C1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf115Q9D0C1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf115Q9D0C1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.33□□□□□ -0.11
Rnf115Q9D0C1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf115Q9D0C1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Rnf115Q9D0C1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Gm37722-201ENSMUST00000193757 208 ntBASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.33□□□□□ -0.12
Rnf115Q9D0C1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf115Q9D0C1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rnf115Q9D0C1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf115Q9D0C1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf115Q9D0C1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms