Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Flg-201ENSMUST00000050758 1488 ntBASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Gm6211-202ENSMUST00000167849 925 ntBASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
Hdhd3Q9CYW4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Gm42642-201ENSMUST00000200683 355 ntBASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.68□□□□□ -0.22
Hdhd3Q9CYW4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 AV356131-201ENSMUST00000206201 750 ntBASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdhd3Q9CYW4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hdhd3Q9CYW4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms