Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Gm27000-201ENSMUST00000182943 842 ntBASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Gm37292-201ENSMUST00000192062 758 ntBASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Ssu72Q9CY97 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssu72Q9CY97 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ssu72Q9CY97 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssu72Q9CY97 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssu72Q9CY97 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssu72Q9CY97 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssu72Q9CY97 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssu72Q9CY97 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssu72Q9CY97 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ssu72Q9CY97 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssu72Q9CY97 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssu72Q9CY97 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ssu72Q9CY97 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssu72Q9CY97 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssu72Q9CY97 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssu72Q9CY97 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ssu72Q9CY97 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssu72Q9CY97 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssu72Q9CY97 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ssu72Q9CY97 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ssu72Q9CY97 Gm42569-201ENSMUST00000200539 472 ntBASIC16.66■□□□□ 0.26
Ssu72Q9CY97 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.66■□□□□ 0.26
Ssu72Q9CY97 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssu72Q9CY97 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssu72Q9CY97 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssu72Q9CY97 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ssu72Q9CY97 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssu72Q9CY97 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssu72Q9CY97 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Gm12382-201ENSMUST00000122005 922 ntBASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssu72Q9CY97 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.65■□□□□ 0.26
Ssu72Q9CY97 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ssu72Q9CY97 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.64■□□□□ 0.26
Ssu72Q9CY97 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssu72Q9CY97 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssu72Q9CY97 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.63■□□□□ 0.25
Ssu72Q9CY97 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssu72Q9CY97 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssu72Q9CY97 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms