Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Gm44313-201ENSMUST00000198018 138 ntBASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Gm44486-201ENSMUST00000198508 138 ntBASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Gm44314-201ENSMUST00000199263 138 ntBASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Gm44394-201ENSMUST00000199558 138 ntBASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Gm44484-201ENSMUST00000199873 138 ntBASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Gm44466-201ENSMUST00000200264 138 ntBASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Gm44359-201ENSMUST00000200671 138 ntBASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nip7Q9CXK8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nip7Q9CXK8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nip7Q9CXK8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nip7Q9CXK8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nip7Q9CXK8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nip7Q9CXK8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.83■□□□□ 0.92
Nip7Q9CXK8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nip7Q9CXK8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
Nip7Q9CXK8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
Nip7Q9CXK8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Nip7Q9CXK8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nip7Q9CXK8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.82■□□□□ 0.92
Nip7Q9CXK8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nip7Q9CXK8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nip7Q9CXK8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nip7Q9CXK8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Nip7Q9CXK8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nip7Q9CXK8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nip7Q9CXK8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nip7Q9CXK8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Nip7Q9CXK8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.82■□□□□ 0.92
Nip7Q9CXK8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nip7Q9CXK8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nip7Q9CXK8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nip7Q9CXK8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nip7Q9CXK8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nip7Q9CXK8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nip7Q9CXK8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nip7Q9CXK8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nip7Q9CXK8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nip7Q9CXK8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nip7Q9CXK8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nip7Q9CXK8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nip7Q9CXK8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nip7Q9CXK8 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.81■□□□□ 0.92
Nip7Q9CXK8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.81■□□□□ 0.92
Nip7Q9CXK8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nip7Q9CXK8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nip7Q9CXK8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nip7Q9CXK8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nip7Q9CXK8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nip7Q9CXK8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nip7Q9CXK8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nip7Q9CXK8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.8■□□□□ 0.92
Nip7Q9CXK8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.8■□□□□ 0.92
Nip7Q9CXK8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.8■□□□□ 0.92
Nip7Q9CXK8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nip7Q9CXK8 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.8■□□□□ 0.92
Nip7Q9CXK8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Nip7Q9CXK8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Nip7Q9CXK8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nip7Q9CXK8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nip7Q9CXK8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nip7Q9CXK8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nip7Q9CXK8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nip7Q9CXK8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Nip7Q9CXK8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nip7Q9CXK8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nip7Q9CXK8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nip7Q9CXK8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nip7Q9CXK8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nip7Q9CXK8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.79■□□□□ 0.92
Nip7Q9CXK8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nip7Q9CXK8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.79■□□□□ 0.92
Nip7Q9CXK8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nip7Q9CXK8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nip7Q9CXK8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nip7Q9CXK8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nip7Q9CXK8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Nip7Q9CXK8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nip7Q9CXK8 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Mir5131-201ENSMUST00000175426 93 ntBASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Gm5712-201ENSMUST00000199748 1043 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms