Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Gm12085-201ENSMUST00000119263 940 ntBASIC19.72■□□□□ 0.75
Smc3Q9CW03 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.72■□□□□ 0.75
Smc3Q9CW03 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc3Q9CW03 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smc3Q9CW03 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc3Q9CW03 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smc3Q9CW03 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc3Q9CW03 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.71■□□□□ 0.75
Smc3Q9CW03 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc3Q9CW03 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Smc3Q9CW03 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Smc3Q9CW03 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Smc3Q9CW03 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smc3Q9CW03 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smc3Q9CW03 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc3Q9CW03 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smc3Q9CW03 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc3Q9CW03 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc3Q9CW03 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Smc3Q9CW03 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Smc3Q9CW03 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Gm9731-201ENSMUST00000209480 747 ntBASIC19.7■□□□□ 0.74
Smc3Q9CW03 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc3Q9CW03 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Smc3Q9CW03 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Gm27000-201ENSMUST00000182943 842 ntBASIC19.69■□□□□ 0.74
Smc3Q9CW03 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Smc3Q9CW03 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.69■□□□□ 0.74
Smc3Q9CW03 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc3Q9CW03 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc3Q9CW03 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc3Q9CW03 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc3Q9CW03 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc3Q9CW03 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smc3Q9CW03 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc3Q9CW03 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc3Q9CW03 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc3Q9CW03 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Smc3Q9CW03 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smc3Q9CW03 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc3Q9CW03 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc3Q9CW03 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms