Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Sft2d3Q9CSV6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 Gm45058-201ENSMUST00000205810 766 ntBASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sft2d3Q9CSV6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sft2d3Q9CSV6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sft2d3Q9CSV6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sft2d3Q9CSV6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sft2d3Q9CSV6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sft2d3Q9CSV6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sft2d3Q9CSV6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sft2d3Q9CSV6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Sft2d3Q9CSV6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sft2d3Q9CSV6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.27□□□□□ -0.12
Sft2d3Q9CSV6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Sft2d3Q9CSV6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sft2d3Q9CSV6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sft2d3Q9CSV6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sft2d3Q9CSV6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sft2d3Q9CSV6 Gm7638-201ENSMUST00000121348 967 ntBASIC14.27□□□□□ -0.13
Sft2d3Q9CSV6 Mir5130-201ENSMUST00000175160 84 ntBASIC14.27□□□□□ -0.13
Sft2d3Q9CSV6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.27□□□□□ -0.13
Sft2d3Q9CSV6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Sft2d3Q9CSV6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sft2d3Q9CSV6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sft2d3Q9CSV6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sft2d3Q9CSV6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sft2d3Q9CSV6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sft2d3Q9CSV6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sft2d3Q9CSV6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sft2d3Q9CSV6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sft2d3Q9CSV6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sft2d3Q9CSV6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sft2d3Q9CSV6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sft2d3Q9CSV6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Sft2d3Q9CSV6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sft2d3Q9CSV6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sft2d3Q9CSV6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sft2d3Q9CSV6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sft2d3Q9CSV6 Gm13216-201ENSMUST00000117145 591 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms