Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Gm15590-201ENSMUST00000078419 552 ntBASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cldnd1Q9CQX5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldnd1Q9CQX5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cldnd1Q9CQX5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldnd1Q9CQX5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldnd1Q9CQX5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldnd1Q9CQX5 Gm24513-201ENSMUST00000174964 138 ntBASIC17.16■□□□□ 0.34
Cldnd1Q9CQX5 Gm4535-201ENSMUST00000182274 558 ntBASIC17.16■□□□□ 0.34
Cldnd1Q9CQX5 Gm27397-201ENSMUST00000184997 107 ntBASIC17.16■□□□□ 0.34
Cldnd1Q9CQX5 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.16■□□□□ 0.34
Cldnd1Q9CQX5 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldnd1Q9CQX5 Gm10355-201ENSMUST00000097146 517 ntBASIC17.16■□□□□ 0.34
Cldnd1Q9CQX5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldnd1Q9CQX5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.16■□□□□ 0.34
Cldnd1Q9CQX5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldnd1Q9CQX5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cldnd1Q9CQX5 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Gm14494-201ENSMUST00000118786 435 ntBASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd1Q9CQX5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cldnd1Q9CQX5 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 Gm14822-201ENSMUST00000122247 291 ntBASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 Gm7506-201ENSMUST00000207758 815 ntBASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldnd1Q9CQX5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Iqck-206ENSMUST00000208658 2891 ntBASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd1Q9CQX5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms