Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim11Q99PQ2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim11Q99PQ2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim11Q99PQ2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.08■□□□□ 0.65
Trim11Q99PQ2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trim11Q99PQ2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim11Q99PQ2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim11Q99PQ2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Trim11Q99PQ2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim11Q99PQ2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim11Q99PQ2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.08■□□□□ 0.64
Trim11Q99PQ2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Trim11Q99PQ2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim11Q99PQ2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim11Q99PQ2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim11Q99PQ2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim11Q99PQ2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim11Q99PQ2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim11Q99PQ2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Gm27463-201ENSMUST00000183569 57 ntBASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim11Q99PQ2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trim11Q99PQ2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim11Q99PQ2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim11Q99PQ2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim11Q99PQ2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim11Q99PQ2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim11Q99PQ2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim11Q99PQ2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim11Q99PQ2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trim11Q99PQ2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim11Q99PQ2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim11Q99PQ2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim11Q99PQ2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim11Q99PQ2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Trim11Q99PQ2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim11Q99PQ2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms