Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh15Q99PJ1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcdh15Q99PJ1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh15Q99PJ1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh15Q99PJ1 Gm14701-201ENSMUST00000117156 348 ntBASIC18.98■□□□□ 0.63
Pcdh15Q99PJ1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.98■□□□□ 0.63
Pcdh15Q99PJ1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh15Q99PJ1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh15Q99PJ1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh15Q99PJ1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh15Q99PJ1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh15Q99PJ1 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh15Q99PJ1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh15Q99PJ1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh15Q99PJ1 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.98■□□□□ 0.63
Pcdh15Q99PJ1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh15Q99PJ1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh15Q99PJ1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh15Q99PJ1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh15Q99PJ1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdh15Q99PJ1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh15Q99PJ1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh15Q99PJ1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Pcdh15Q99PJ1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh15Q99PJ1 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.97■□□□□ 0.63
Pcdh15Q99PJ1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh15Q99PJ1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh15Q99PJ1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh15Q99PJ1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh15Q99PJ1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh15Q99PJ1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh15Q99PJ1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh15Q99PJ1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh15Q99PJ1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh15Q99PJ1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh15Q99PJ1 Gm27646-201ENSMUST00000183989 110 ntBASIC18.96■□□□□ 0.63
Pcdh15Q99PJ1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.96■□□□□ 0.63
Pcdh15Q99PJ1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh15Q99PJ1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh15Q99PJ1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh15Q99PJ1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh15Q99PJ1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh15Q99PJ1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh15Q99PJ1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.96■□□□□ 0.63
Pcdh15Q99PJ1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh15Q99PJ1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh15Q99PJ1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.96■□□□□ 0.63
Pcdh15Q99PJ1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh15Q99PJ1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Mir6956-201ENSMUST00000183598 62 ntBASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdh15Q99PJ1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh15Q99PJ1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh15Q99PJ1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh15Q99PJ1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh15Q99PJ1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh15Q99PJ1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh15Q99PJ1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh15Q99PJ1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh15Q99PJ1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh15Q99PJ1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh15Q99PJ1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms