Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Actl10-202ENSMUST00000226583 1501 ntBASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rtn4rQ99PI8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rtn4rQ99PI8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtn4rQ99PI8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.79□□□□□ -0.04
Rtn4rQ99PI8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.79□□□□□ -0.04
Rtn4rQ99PI8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtn4rQ99PI8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtn4rQ99PI8 Mir1668-201ENSMUST00000184114 107 ntBASIC14.79□□□□□ -0.04
Rtn4rQ99PI8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Rtn4rQ99PI8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtn4rQ99PI8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtn4rQ99PI8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtn4rQ99PI8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtn4rQ99PI8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rtn4rQ99PI8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rtn4rQ99PI8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtn4rQ99PI8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rtn4rQ99PI8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Gm6659-201ENSMUST00000174752 547 ntBASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.78□□□□□ -0.04
Rtn4rQ99PI8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rtn4rQ99PI8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rtn4rQ99PI8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rtn4rQ99PI8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.77□□□□□ -0.04
Rtn4rQ99PI8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rtn4rQ99PI8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rtn4rQ99PI8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rtn4rQ99PI8 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.77□□□□□ -0.04
Rtn4rQ99PI8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rtn4rQ99PI8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rtn4rQ99PI8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rtn4rQ99PI8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtn4rQ99PI8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtn4rQ99PI8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.77□□□□□ -0.05
Rtn4rQ99PI8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtn4rQ99PI8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtn4rQ99PI8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rtn4rQ99PI8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtn4rQ99PI8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtn4rQ99PI8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtn4rQ99PI8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rQ99PI8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rQ99PI8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rQ99PI8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rQ99PI8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rQ99PI8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rQ99PI8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rQ99PI8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rQ99PI8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rQ99PI8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rQ99PI8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rQ99PI8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.76□□□□□ -0.05
Rtn4rQ99PI8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.76□□□□□ -0.05
Rtn4rQ99PI8 Gm18101-201ENSMUST00000215769 548 ntBASIC14.76□□□□□ -0.05
Rtn4rQ99PI8 Gm21559-201ENSMUST00000220638 855 ntBASIC14.76□□□□□ -0.05
Rtn4rQ99PI8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms