Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4Q99P72 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4Q99P72 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4Q99P72 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4Q99P72 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4Q99P72 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4Q99P72 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4Q99P72 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4Q99P72 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4Q99P72 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4Q99P72 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4Q99P72 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4Q99P72 Gm14859-201ENSMUST00000117752 357 ntBASIC21.33■■□□□ 1.01
Rtn4Q99P72 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
Rtn4Q99P72 Gm13474-201ENSMUST00000122466 815 ntBASIC21.33■■□□□ 1.01
Rtn4Q99P72 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4Q99P72 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.33■■□□□ 1.01
Rtn4Q99P72 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.33■■□□□ 1.01
Rtn4Q99P72 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4Q99P72 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn4Q99P72 Gm15635-204ENSMUST00000208024 2539 ntBASIC21.33■■□□□ 1
Rtn4Q99P72 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Rtn4Q99P72 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rtn4Q99P72 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Rtn4Q99P72 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rtn4Q99P72 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.33■■□□□ 1
Rtn4Q99P72 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC21.33■■□□□ 1
Rtn4Q99P72 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
Rtn4Q99P72 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC21.33■■□□□ 1
Rtn4Q99P72 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.33■■□□□ 1
Rtn4Q99P72 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rtn4Q99P72 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rtn4Q99P72 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Rtn4Q99P72 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rtn4Q99P72 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtn4Q99P72 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtn4Q99P72 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtn4Q99P72 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.32■■□□□ 1
Rtn4Q99P72 Gm27389-201ENSMUST00000183622 195 ntBASIC21.32■■□□□ 1
Rtn4Q99P72 Gm43377-201ENSMUST00000201640 455 ntBASIC21.32■■□□□ 1
Rtn4Q99P72 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Rtn4Q99P72 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rtn4Q99P72 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtn4Q99P72 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rtn4Q99P72 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtn4Q99P72 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Rtn4Q99P72 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn4Q99P72 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn4Q99P72 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rtn4Q99P72 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn4Q99P72 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn4Q99P72 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC21.31■■□□□ 1
Rtn4Q99P72 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.31■■□□□ 1
Rtn4Q99P72 Gm7213-201ENSMUST00000215977 950 ntBASIC21.31■■□□□ 1
Rtn4Q99P72 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.31■■□□□ 1
Rtn4Q99P72 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn4Q99P72 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rtn4Q99P72 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtn4Q99P72 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.3■■□□□ 1
Rtn4Q99P72 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Rtn4Q99P72 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Rtn4Q99P72 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtn4Q99P72 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Rtn4Q99P72 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rtn4Q99P72 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC21.3■■□□□ 1
Rtn4Q99P72 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rtn4Q99P72 Gm21559-201ENSMUST00000220638 855 ntBASIC21.3■■□□□ 1
Rtn4Q99P72 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtn4Q99P72 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rtn4Q99P72 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtn4Q99P72 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rtn4Q99P72 Gm8587-201ENSMUST00000076538 843 ntBASIC21.3■■□□□ 1
Rtn4Q99P72 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtn4Q99P72 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Rtn4Q99P72 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Rtn4Q99P72 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Rtn4Q99P72 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn4Q99P72 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn4Q99P72 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.29■■□□□ 1
Rtn4Q99P72 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn4Q99P72 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn4Q99P72 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtn4Q99P72 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn4Q99P72 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn4Q99P72 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn4Q99P72 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn4Q99P72 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtn4Q99P72 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn4Q99P72 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4Q99P72 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4Q99P72 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rtn4Q99P72 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Rtn4Q99P72 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Rtn4Q99P72 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4Q99P72 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.28■■□□□ 1
Rtn4Q99P72 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rtn4Q99P72 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC21.28■■□□□ 1
Rtn4Q99P72 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4Q99P72 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
Rtn4Q99P72 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 142.9 ms