Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Phf7-203ENSMUST00000226565 1971 ntBASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd3Q99LE3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd3Q99LE3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd3Q99LE3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd3Q99LE3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd3Q99LE3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.4■□□□□ 0.38
Lysmd3Q99LE3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd3Q99LE3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd3Q99LE3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd3Q99LE3 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.4■□□□□ 0.38
Lysmd3Q99LE3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Lysmd3Q99LE3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Lysmd3Q99LE3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Lysmd3Q99LE3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd3Q99LE3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd3Q99LE3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd3Q99LE3 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.4■□□□□ 0.38
Lysmd3Q99LE3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Lysmd3Q99LE3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Lysmd3Q99LE3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Mir770-201ENSMUST00000103252 94 ntBASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Gm11336-201ENSMUST00000118168 334 ntBASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd3Q99LE3 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Gm7284-201ENSMUST00000131667 944 ntBASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Gm6623-201ENSMUST00000173570 544 ntBASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Lysmd3Q99LE3 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.37■□□□□ 0.37
Lysmd3Q99LE3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.37■□□□□ 0.37
Lysmd3Q99LE3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lysmd3Q99LE3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lysmd3Q99LE3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms