Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm10418-201ENSMUST00000100943 576 ntBASIC19.3■□□□□ 0.68
Smc1bQ920F6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smc1bQ920F6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smc1bQ920F6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.3■□□□□ 0.68
Smc1bQ920F6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc1bQ920F6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smc1bQ920F6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc1bQ920F6 Tgds-204ENSMUST00000228543 1594 ntBASIC19.3■□□□□ 0.68
Smc1bQ920F6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smc1bQ920F6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc1bQ920F6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc1bQ920F6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc1bQ920F6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc1bQ920F6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smc1bQ920F6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc1bQ920F6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc1bQ920F6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Smc1bQ920F6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Smc1bQ920F6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.29■□□□□ 0.68
Smc1bQ920F6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc1bQ920F6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc1bQ920F6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc1bQ920F6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smc1bQ920F6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smc1bQ920F6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc1bQ920F6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc1bQ920F6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc1bQ920F6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc1bQ920F6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Smc1bQ920F6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc1bQ920F6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Smc1bQ920F6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smc1bQ920F6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.28■□□□□ 0.68
Smc1bQ920F6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smc1bQ920F6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.28■□□□□ 0.68
Smc1bQ920F6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Smc1bQ920F6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc1bQ920F6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc1bQ920F6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smc1bQ920F6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc1bQ920F6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smc1bQ920F6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.28■□□□□ 0.68
Smc1bQ920F6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Smc1bQ920F6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.27■□□□□ 0.68
Smc1bQ920F6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smc1bQ920F6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.27■□□□□ 0.68
Smc1bQ920F6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.27■□□□□ 0.68
Smc1bQ920F6 Gm37025-201ENSMUST00000195159 829 ntBASIC19.27■□□□□ 0.68
Smc1bQ920F6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Smc1bQ920F6 Gm45328-201ENSMUST00000210942 917 ntBASIC19.27■□□□□ 0.68
Smc1bQ920F6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc1bQ920F6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc1bQ920F6 Birc2-201ENSMUST00000054878 378 ntBASIC19.27■□□□□ 0.68
Smc1bQ920F6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smc1bQ920F6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc1bQ920F6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Smc1bQ920F6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.27■□□□□ 0.67
Smc1bQ920F6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.27■□□□□ 0.67
Smc1bQ920F6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smc1bQ920F6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smc1bQ920F6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smc1bQ920F6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smc1bQ920F6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc1bQ920F6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smc1bQ920F6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc1bQ920F6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc1bQ920F6 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.26■□□□□ 0.67
Smc1bQ920F6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Smc1bQ920F6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Smc1bQ920F6 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.26■□□□□ 0.67
Smc1bQ920F6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.26■□□□□ 0.67
Smc1bQ920F6 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.26■□□□□ 0.67
Smc1bQ920F6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc1bQ920F6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smc1bQ920F6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Smc1bQ920F6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smc1bQ920F6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.26■□□□□ 0.67
Smc1bQ920F6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smc1bQ920F6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smc1bQ920F6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc1bQ920F6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc1bQ920F6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc1bQ920F6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc1bQ920F6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc1bQ920F6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smc1bQ920F6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smc1bQ920F6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smc1bQ920F6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc1bQ920F6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smc1bQ920F6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc1bQ920F6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Smc1bQ920F6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc1bQ920F6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc1bQ920F6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Smc1bQ920F6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Smc1bQ920F6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Smc1bQ920F6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Smc1bQ920F6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc1bQ920F6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Smc1bQ920F6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms