Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdha11Q91Y19 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdha11Q91Y19 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdha11Q91Y19 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdha11Q91Y19 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdha11Q91Y19 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha11Q91Y19 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.64■□□□□ 0.41
Pcdha11Q91Y19 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdha11Q91Y19 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha11Q91Y19 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha11Q91Y19 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha11Q91Y19 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.64■□□□□ 0.41
Pcdha11Q91Y19 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha11Q91Y19 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdha11Q91Y19 Phf7-203ENSMUST00000226565 1971 ntBASIC17.64■□□□□ 0.41
Pcdha11Q91Y19 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha11Q91Y19 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdha11Q91Y19 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Gm11336-201ENSMUST00000118168 334 ntBASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha11Q91Y19 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha11Q91Y19 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha11Q91Y19 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha11Q91Y19 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdha11Q91Y19 Gm33142-201ENSMUST00000193913 867 ntBASIC17.6■□□□□ 0.41
Pcdha11Q91Y19 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms