Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha9Q91Y11 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha9Q91Y11 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha9Q91Y11 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha9Q91Y11 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha9Q91Y11 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha9Q91Y11 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdha9Q91Y11 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Pcdha9Q91Y11 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha9Q91Y11 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha9Q91Y11 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha9Q91Y11 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha9Q91Y11 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha9Q91Y11 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.83■□□□□ 0.45
Pcdha9Q91Y11 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha9Q91Y11 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha9Q91Y11 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.83■□□□□ 0.44
Pcdha9Q91Y11 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdha9Q91Y11 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha9Q91Y11 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha9Q91Y11 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha9Q91Y11 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
Pcdha9Q91Y11 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha9Q91Y11 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdha9Q91Y11 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha9Q91Y11 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha9Q91Y11 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha9Q91Y11 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha9Q91Y11 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha9Q91Y11 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha9Q91Y11 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha9Q91Y11 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha9Q91Y11 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha9Q91Y11 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha9Q91Y11 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha9Q91Y11 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha9Q91Y11 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha9Q91Y11 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha9Q91Y11 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.82■□□□□ 0.44
Pcdha9Q91Y11 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha9Q91Y11 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha9Q91Y11 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha9Q91Y11 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Gm11336-201ENSMUST00000118168 334 ntBASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Gm44450-201ENSMUST00000199528 114 ntBASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha9Q91Y11 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha9Q91Y11 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha9Q91Y11 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha9Q91Y11 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha9Q91Y11 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha9Q91Y11 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha9Q91Y11 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha9Q91Y11 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha9Q91Y11 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha9Q91Y11 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha9Q91Y11 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha9Q91Y11 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdha9Q91Y11 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha9Q91Y11 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha9Q91Y11 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha9Q91Y11 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha9Q91Y11 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha9Q91Y11 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha9Q91Y11 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha9Q91Y11 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha9Q91Y11 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha9Q91Y11 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdha9Q91Y11 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Pcdha9Q91Y11 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha9Q91Y11 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha9Q91Y11 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha9Q91Y11 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha9Q91Y11 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.79■□□□□ 0.44
Pcdha9Q91Y11 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha9Q91Y11 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdha9Q91Y11 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha9Q91Y11 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms