Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Gm7370-201ENSMUST00000219471 767 ntBASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb1Q91Y08 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb1Q91Y08 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb1Q91Y08 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb1Q91Y08 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb1Q91Y08 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhb1Q91Y08 Gm16061-201ENSMUST00000122167 857 ntBASIC17.42■□□□□ 0.38
Pcdhb1Q91Y08 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdhb1Q91Y08 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb1Q91Y08 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb1Q91Y08 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb1Q91Y08 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb1Q91Y08 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb1Q91Y08 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb1Q91Y08 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.42■□□□□ 0.38
Pcdhb1Q91Y08 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb1Q91Y08 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 Gm13559-201ENSMUST00000120476 863 ntBASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 Gm13474-201ENSMUST00000122466 815 ntBASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb1Q91Y08 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb1Q91Y08 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.39■□□□□ 0.38
Pcdhb1Q91Y08 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb1Q91Y08 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb1Q91Y08 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb1Q91Y08 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb1Q91Y08 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb1Q91Y08 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb1Q91Y08 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb1Q91Y08 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Pcdhb1Q91Y08 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb1Q91Y08 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb1Q91Y08 Gm13186-201ENSMUST00000118031 316 ntBASIC17.39■□□□□ 0.37
Pcdhb1Q91Y08 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb1Q91Y08 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb1Q91Y08 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb1Q91Y08 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb1Q91Y08 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb1Q91Y08 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb1Q91Y08 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcdhb1Q91Y08 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb1Q91Y08 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb1Q91Y08 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb1Q91Y08 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb1Q91Y08 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms