Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb4Q91XZ6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb4Q91XZ6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Gm12085-201ENSMUST00000119263 940 ntBASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Gm37025-201ENSMUST00000195159 829 ntBASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb4Q91XZ6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb4Q91XZ6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb4Q91XZ6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb4Q91XZ6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb4Q91XZ6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb4Q91XZ6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb4Q91XZ6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb4Q91XZ6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb4Q91XZ6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb4Q91XZ6 Gm8520-201ENSMUST00000186517 868 ntBASIC16.62■□□□□ 0.25
Pcdhb4Q91XZ6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb4Q91XZ6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb4Q91XZ6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb4Q91XZ6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdhb4Q91XZ6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb4Q91XZ6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb4Q91XZ6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb4Q91XZ6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Mir1199-201ENSMUST00000117015 119 ntBASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Gm17661-201ENSMUST00000170317 270 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms