Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb6Q91XZ4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb6Q91XZ4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb6Q91XZ4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb6Q91XZ4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb6Q91XZ4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Gm15565-201ENSMUST00000118890 427 ntBASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb6Q91XZ4 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.21■□□□□ 0.34
Pcdhb6Q91XZ4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhb6Q91XZ4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Phf7-203ENSMUST00000226565 1971 ntBASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Gm7889-201ENSMUST00000185591 958 ntBASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdhb6Q91XZ4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb6Q91XZ4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Gm7213-201ENSMUST00000215977 950 ntBASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Gm18115-201ENSMUST00000221209 621 ntBASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Gm10566-201ENSMUST00000086739 996 ntBASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms