Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb5Q91XX5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Pcdhgb5Q91XX5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb5Q91XX5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb5Q91XX5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb5Q91XX5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhgb5Q91XX5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb5Q91XX5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb5Q91XX5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Gm8969-201ENSMUST00000199694 526 ntBASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb5Q91XX5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Birc2-201ENSMUST00000054878 378 ntBASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb5Q91XX5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Gm12895-201ENSMUST00000122214 226 ntBASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb5Q91XX5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb5Q91XX5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb5Q91XX5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb5Q91XX5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb5Q91XX5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb5Q91XX5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb5Q91XX5 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.59■□□□□ 0.25
Pcdhgb5Q91XX5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdhgb5Q91XX5 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.59■□□□□ 0.25
Pcdhgb5Q91XX5 Mzt1-203ENSMUST00000227948 952 ntBASIC16.59■□□□□ 0.25
Pcdhgb5Q91XX5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdhgb5Q91XX5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb5Q91XX5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb5Q91XX5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.58■□□□□ 0.25
Pcdhgb5Q91XX5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb5Q91XX5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb5Q91XX5 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Pcdhgb5Q91XX5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb5Q91XX5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb5Q91XX5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb5Q91XX5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb5Q91XX5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb5Q91XX5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb5Q91XX5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms