Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgc5Q91XW9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdhgc5Q91XW9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdhgc5Q91XW9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.06■□□□□ 0.64
Pcdhgc5Q91XW9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgc5Q91XW9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhgc5Q91XW9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdhgc5Q91XW9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgc5Q91XW9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgc5Q91XW9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgc5Q91XW9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc5Q91XW9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc5Q91XW9 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.05■□□□□ 0.64
Pcdhgc5Q91XW9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc5Q91XW9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc5Q91XW9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhgc5Q91XW9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc5Q91XW9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc5Q91XW9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pcdhgc5Q91XW9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc5Q91XW9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc5Q91XW9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc5Q91XW9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC19.05■□□□□ 0.64
Pcdhgc5Q91XW9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc5Q91XW9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc5Q91XW9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc5Q91XW9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgc5Q91XW9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Gm5867-201ENSMUST00000063197 592 ntBASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc5Q91XW9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Pcdhgc5Q91XW9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgc5Q91XW9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgc5Q91XW9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgc5Q91XW9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgc5Q91XW9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgc5Q91XW9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Pcdhgc5Q91XW9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.02■□□□□ 0.64
Pcdhgc5Q91XW9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Pcdhgc5Q91XW9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgc5Q91XW9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
Pcdhgc5Q91XW9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgc5Q91XW9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgc5Q91XW9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.02■□□□□ 0.64
Pcdhgc5Q91XW9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgc5Q91XW9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgc5Q91XW9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhgc5Q91XW9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhgc5Q91XW9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhgc5Q91XW9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgc5Q91XW9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Pcdhgc5Q91XW9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgc5Q91XW9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgc5Q91XW9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgc5Q91XW9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgc5Q91XW9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgc5Q91XW9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pcdhgc5Q91XW9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms