Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx41Q91VN6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.23■□□□□ 0.67
Ddx41Q91VN6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx41Q91VN6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx41Q91VN6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx41Q91VN6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx41Q91VN6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Ddx41Q91VN6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx41Q91VN6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.23■□□□□ 0.67
Ddx41Q91VN6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx41Q91VN6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx41Q91VN6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx41Q91VN6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ddx41Q91VN6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx41Q91VN6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.22■□□□□ 0.67
Ddx41Q91VN6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ddx41Q91VN6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx41Q91VN6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx41Q91VN6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx41Q91VN6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx41Q91VN6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.21■□□□□ 0.67
Ddx41Q91VN6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx41Q91VN6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.21■□□□□ 0.67
Ddx41Q91VN6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.21■□□□□ 0.67
Ddx41Q91VN6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ddx41Q91VN6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx41Q91VN6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx41Q91VN6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.21■□□□□ 0.67
Ddx41Q91VN6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ddx41Q91VN6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.21■□□□□ 0.67
Ddx41Q91VN6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx41Q91VN6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx41Q91VN6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx41Q91VN6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ddx41Q91VN6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx41Q91VN6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx41Q91VN6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx41Q91VN6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.2■□□□□ 0.66
Ddx41Q91VN6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ddx41Q91VN6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx41Q91VN6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx41Q91VN6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Ddx41Q91VN6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx41Q91VN6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx41Q91VN6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx41Q91VN6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Ddx41Q91VN6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx41Q91VN6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx41Q91VN6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx41Q91VN6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.19■□□□□ 0.66
Ddx41Q91VN6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.19■□□□□ 0.66
Ddx41Q91VN6 Gm5587-201ENSMUST00000206270 674 ntBASIC19.19■□□□□ 0.66
Ddx41Q91VN6 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.19■□□□□ 0.66
Ddx41Q91VN6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ddx41Q91VN6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx41Q91VN6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.19■□□□□ 0.66
Ddx41Q91VN6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx41Q91VN6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ddx41Q91VN6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Ddx41Q91VN6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx41Q91VN6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx41Q91VN6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx41Q91VN6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx41Q91VN6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx41Q91VN6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx41Q91VN6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.17■□□□□ 0.66
Ddx41Q91VN6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.17■□□□□ 0.66
Ddx41Q91VN6 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.17■□□□□ 0.66
Ddx41Q91VN6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx41Q91VN6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx41Q91VN6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Ddx41Q91VN6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx41Q91VN6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx41Q91VN6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ddx41Q91VN6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx41Q91VN6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms