Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.04□□□□□ -0.16
H1fooQ8VIK3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Gm18958-201ENSMUST00000174258 762 ntBASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H1fooQ8VIK3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H1fooQ8VIK3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
H1fooQ8VIK3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.02□□□□□ -0.16
H1fooQ8VIK3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H1fooQ8VIK3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H1fooQ8VIK3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
H1fooQ8VIK3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
H1fooQ8VIK3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H1fooQ8VIK3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
H1fooQ8VIK3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H1fooQ8VIK3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H1fooQ8VIK3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H1fooQ8VIK3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H1fooQ8VIK3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H1fooQ8VIK3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
H1fooQ8VIK3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H1fooQ8VIK3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
H1fooQ8VIK3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.02□□□□□ -0.17
H1fooQ8VIK3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.02□□□□□ -0.17
H1fooQ8VIK3 Il3ra-202ENSMUST00000223589 738 ntBASIC14.02□□□□□ -0.17
H1fooQ8VIK3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
H1fooQ8VIK3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
H1fooQ8VIK3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H1fooQ8VIK3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
H1fooQ8VIK3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
H1fooQ8VIK3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
H1fooQ8VIK3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H1fooQ8VIK3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
H1fooQ8VIK3 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.02□□□□□ -0.17
H1fooQ8VIK3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Gm13216-201ENSMUST00000117145 591 ntBASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Gm27000-201ENSMUST00000182943 842 ntBASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms