Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.19■□□□□ 0.18
Pcdh18Q8VHR0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh18Q8VHR0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Gm4968-201ENSMUST00000071458 858 ntBASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdh18Q8VHR0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Mtag2-201ENSMUST00000058665 714 ntBASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms