Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.73□□□□□ -0.21
Rab40cQ8VHQ4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.73□□□□□ -0.21
Rab40cQ8VHQ4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40cQ8VHQ4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rab40cQ8VHQ4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40cQ8VHQ4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40cQ8VHQ4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40cQ8VHQ4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40cQ8VHQ4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40cQ8VHQ4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.73□□□□□ -0.21
Rab40cQ8VHQ4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.73□□□□□ -0.21
Rab40cQ8VHQ4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40cQ8VHQ4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rab40cQ8VHQ4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Gm11927-201ENSMUST00000118472 759 ntBASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.71□□□□□ -0.21
Rab40cQ8VHQ4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab40cQ8VHQ4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.22
Rab40cQ8VHQ4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab40cQ8VHQ4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab40cQ8VHQ4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab40cQ8VHQ4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab40cQ8VHQ4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Rab40cQ8VHQ4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab40cQ8VHQ4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab40cQ8VHQ4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Rab40cQ8VHQ4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab40cQ8VHQ4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab40cQ8VHQ4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab40cQ8VHQ4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Gm6211-202ENSMUST00000167849 925 ntBASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40cQ8VHQ4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms