Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Gm25911-201ENSMUST00000157621 56 ntBASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 Gm10175-201ENSMUST00000086013 645 ntBASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 BC021767-201ENSMUST00000126387 1716 ntBASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lmcd1Q8VEE1 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.83■□□□□ 0.45
Lmcd1Q8VEE1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lmcd1Q8VEE1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lmcd1Q8VEE1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lmcd1Q8VEE1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lmcd1Q8VEE1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Lmcd1Q8VEE1 Gm6550-201ENSMUST00000187574 993 ntBASIC17.83■□□□□ 0.44
Lmcd1Q8VEE1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.83■□□□□ 0.44
Lmcd1Q8VEE1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lmcd1Q8VEE1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lmcd1Q8VEE1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Lmcd1Q8VEE1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lmcd1Q8VEE1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lmcd1Q8VEE1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lmcd1Q8VEE1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lmcd1Q8VEE1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lmcd1Q8VEE1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Lmcd1Q8VEE1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lmcd1Q8VEE1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Lmcd1Q8VEE1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lmcd1Q8VEE1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Gm13036-201ENSMUST00000117799 748 ntBASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Gm25745-201ENSMUST00000174945 133 ntBASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Gm27628-201ENSMUST00000184911 107 ntBASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lmcd1Q8VEE1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lmcd1Q8VEE1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms