Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 Gm11355-201ENSMUST00000121120 306 ntBASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ndc1Q8VCB1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ndc1Q8VCB1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.83■□□□□ 0.13
Ndc1Q8VCB1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.83■□□□□ 0.13
Ndc1Q8VCB1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ndc1Q8VCB1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 Gm7284-201ENSMUST00000131667 944 ntBASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndc1Q8VCB1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Actl10-202ENSMUST00000226583 1501 ntBASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndc1Q8VCB1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ndc1Q8VCB1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ndc1Q8VCB1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ndc1Q8VCB1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ndc1Q8VCB1 Gm29518-201ENSMUST00000190858 372 ntBASIC15.81■□□□□ 0.12
Ndc1Q8VCB1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.81■□□□□ 0.12
Ndc1Q8VCB1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Ndc1Q8VCB1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Ndc1Q8VCB1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ndc1Q8VCB1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ndc1Q8VCB1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ndc1Q8VCB1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ndc1Q8VCB1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ndc1Q8VCB1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ndc1Q8VCB1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ndc1Q8VCB1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ndc1Q8VCB1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ndc1Q8VCB1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms