Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Lsm1Q8VC85 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.08■□□□□ 0.16
Lsm1Q8VC85 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm1Q8VC85 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm1Q8VC85 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.08■□□□□ 0.16
Lsm1Q8VC85 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm1Q8VC85 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm1Q8VC85 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm1Q8VC85 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Lsm1Q8VC85 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm1Q8VC85 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm1Q8VC85 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Lsm1Q8VC85 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm1Q8VC85 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm1Q8VC85 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm1Q8VC85 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Lsm1Q8VC85 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm1Q8VC85 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.07■□□□□ 0.16
Lsm1Q8VC85 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm1Q8VC85 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Lsm1Q8VC85 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm1Q8VC85 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm1Q8VC85 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.07■□□□□ 0.16
Lsm1Q8VC85 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm1Q8VC85 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm1Q8VC85 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Lsm1Q8VC85 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm1Q8VC85 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm1Q8VC85 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm1Q8VC85 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm1Q8VC85 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm1Q8VC85 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Lsm1Q8VC85 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Gm29257-201ENSMUST00000186115 639 ntBASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm1Q8VC85 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
Lsm1Q8VC85 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Gm13168-201ENSMUST00000121771 632 ntBASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Gm7791-201ENSMUST00000219066 539 ntBASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Timm23-208ENSMUST00000226683 750 ntBASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm1Q8VC85 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm1Q8VC85 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms