Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf8Q8VC56 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf8Q8VC56 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Gm715-201ENSMUST00000117865 831 ntBASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rnf8Q8VC56 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.15■□□□□ 0.18
Rnf8Q8VC56 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rnf8Q8VC56 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms