Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdt1Q8R4E9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.23■□□□□ 0.19
Cdt1Q8R4E9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.23■□□□□ 0.19
Cdt1Q8R4E9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdt1Q8R4E9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cdt1Q8R4E9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdt1Q8R4E9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdt1Q8R4E9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdt1Q8R4E9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cdt1Q8R4E9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdt1Q8R4E9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdt1Q8R4E9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdt1Q8R4E9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 Gm7791-201ENSMUST00000219066 539 ntBASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdt1Q8R4E9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cdt1Q8R4E9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdt1Q8R4E9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdt1Q8R4E9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdt1Q8R4E9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cdt1Q8R4E9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdt1Q8R4E9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdt1Q8R4E9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdt1Q8R4E9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdt1Q8R4E9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdt1Q8R4E9 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.21■□□□□ 0.19
Cdt1Q8R4E9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdt1Q8R4E9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdt1Q8R4E9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdt1Q8R4E9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cdt1Q8R4E9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cdt1Q8R4E9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Cdt1Q8R4E9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cdt1Q8R4E9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Gm16061-201ENSMUST00000122167 857 ntBASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdt1Q8R4E9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Gm28033-201ENSMUST00000184224 96 ntBASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Gm9731-201ENSMUST00000209480 747 ntBASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdt1Q8R4E9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdt1Q8R4E9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms