Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slf1Q8R3P9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Slf1Q8R3P9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Gm26524-201ENSMUST00000192339 390 ntBASIC16.98■□□□□ 0.31
Slf1Q8R3P9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slf1Q8R3P9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slf1Q8R3P9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slf1Q8R3P9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Slf1Q8R3P9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.96■□□□□ 0.3
Slf1Q8R3P9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Slf1Q8R3P9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Slf1Q8R3P9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Slf1Q8R3P9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Slf1Q8R3P9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Rab3c-203ENSMUST00000224180 967 ntBASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms