Protein–RNA interactions for Protein: Q8R316

Hbp1, HMG box-containing protein 1, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbp1Q8R316 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Hbp1Q8R316 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hbp1Q8R316 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hbp1Q8R316 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hbp1Q8R316 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Gm29707-201ENSMUST00000196325 491 ntBASIC16.59■□□□□ 0.25
Hbp1Q8R316 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.59■□□□□ 0.25
Hbp1Q8R316 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.59■□□□□ 0.25
Hbp1Q8R316 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hbp1Q8R316 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Hbp1Q8R316 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hbp1Q8R316 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Hbp1Q8R316 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hbp1Q8R316 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hbp1Q8R316 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Hbp1Q8R316 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hbp1Q8R316 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.58■□□□□ 0.24
Hbp1Q8R316 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.58■□□□□ 0.24
Hbp1Q8R316 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Hbp1Q8R316 Gm18669-201ENSMUST00000216049 778 ntBASIC16.58■□□□□ 0.24
Hbp1Q8R316 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hbp1Q8R316 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hbp1Q8R316 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hbp1Q8R316 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hbp1Q8R316 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hbp1Q8R316 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hbp1Q8R316 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hbp1Q8R316 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.57■□□□□ 0.24
Hbp1Q8R316 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hbp1Q8R316 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.57■□□□□ 0.24
Hbp1Q8R316 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Hbp1Q8R316 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.57■□□□□ 0.24
Hbp1Q8R316 Gm44450-201ENSMUST00000199528 114 ntBASIC16.57■□□□□ 0.24
Hbp1Q8R316 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hbp1Q8R316 Gm27357-201ENSMUST00000183754 135 ntBASIC16.56■□□□□ 0.24
Hbp1Q8R316 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hbp1Q8R316 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hbp1Q8R316 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Hbp1Q8R316 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hbp1Q8R316 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.56■□□□□ 0.24
Hbp1Q8R316 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Hbp1Q8R316 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.56■□□□□ 0.24
Hbp1Q8R316 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hbp1Q8R316 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hbp1Q8R316 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hbp1Q8R316 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Mir3081-201ENSMUST00000175305 84 ntBASIC16.55■□□□□ 0.24
Hbp1Q8R316 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hbp1Q8R316 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hbp1Q8R316 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hbp1Q8R316 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hbp1Q8R316 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hbp1Q8R316 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Hbp1Q8R316 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hbp1Q8R316 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hbp1Q8R316 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hbp1Q8R316 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hbp1Q8R316 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.54■□□□□ 0.24
Hbp1Q8R316 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hbp1Q8R316 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hbp1Q8R316 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hbp1Q8R316 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hbp1Q8R316 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms