Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Gm33142-201ENSMUST00000193913 867 ntBASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp40Q8R1F9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp40Q8R1F9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp40Q8R1F9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp40Q8R1F9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp40Q8R1F9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Rpp40Q8R1F9 Gm6623-201ENSMUST00000173570 544 ntBASIC17.96■□□□□ 0.47
Rpp40Q8R1F9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.96■□□□□ 0.47
Rpp40Q8R1F9 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.96■□□□□ 0.47
Rpp40Q8R1F9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rpp40Q8R1F9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp40Q8R1F9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.96■□□□□ 0.47
Rpp40Q8R1F9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp40Q8R1F9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp40Q8R1F9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Rpp40Q8R1F9 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 Gm18421-201ENSMUST00000204122 625 ntBASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rpp40Q8R1F9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpp40Q8R1F9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rpp40Q8R1F9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpp40Q8R1F9 Gm11950-201ENSMUST00000121615 838 ntBASIC17.94■□□□□ 0.46
Rpp40Q8R1F9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.94■□□□□ 0.46
Rpp40Q8R1F9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.94■□□□□ 0.46
Rpp40Q8R1F9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpp40Q8R1F9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpp40Q8R1F9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rpp40Q8R1F9 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.94■□□□□ 0.46
Rpp40Q8R1F9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.94■□□□□ 0.46
Rpp40Q8R1F9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rpp40Q8R1F9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Rpp40Q8R1F9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpp40Q8R1F9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rpp40Q8R1F9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.94■□□□□ 0.46
Rpp40Q8R1F9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpp40Q8R1F9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms