Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sf3a1Q8K4Z5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Sf3a1Q8K4Z5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sf3a1Q8K4Z5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sf3a1Q8K4Z5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sf3a1Q8K4Z5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sf3a1Q8K4Z5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sf3a1Q8K4Z5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Sf3a1Q8K4Z5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Sf3a1Q8K4Z5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Sf3a1Q8K4Z5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.52■□□□□ 0.87
Sf3a1Q8K4Z5 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sf3a1Q8K4Z5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Sf3a1Q8K4Z5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sf3a1Q8K4Z5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sf3a1Q8K4Z5 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.51■□□□□ 0.87
Sf3a1Q8K4Z5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sf3a1Q8K4Z5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Sf3a1Q8K4Z5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Sf3a1Q8K4Z5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sf3a1Q8K4Z5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sf3a1Q8K4Z5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.51■□□□□ 0.87
Sf3a1Q8K4Z5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.51■□□□□ 0.87
Sf3a1Q8K4Z5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sf3a1Q8K4Z5 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sf3a1Q8K4Z5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sf3a1Q8K4Z5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sf3a1Q8K4Z5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sf3a1Q8K4Z5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sf3a1Q8K4Z5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Sf3a1Q8K4Z5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sf3a1Q8K4Z5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sf3a1Q8K4Z5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sf3a1Q8K4Z5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sf3a1Q8K4Z5 Gm18101-201ENSMUST00000215769 548 ntBASIC20.5■□□□□ 0.87
Sf3a1Q8K4Z5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sf3a1Q8K4Z5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sf3a1Q8K4Z5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
Sf3a1Q8K4Z5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sf3a1Q8K4Z5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sf3a1Q8K4Z5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sf3a1Q8K4Z5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sf3a1Q8K4Z5 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sf3a1Q8K4Z5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Sf3a1Q8K4Z5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Gm13186-201ENSMUST00000118031 316 ntBASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sf3a1Q8K4Z5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sf3a1Q8K4Z5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sf3a1Q8K4Z5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sf3a1Q8K4Z5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Sf3a1Q8K4Z5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sf3a1Q8K4Z5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.48■□□□□ 0.87
Sf3a1Q8K4Z5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Sf3a1Q8K4Z5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sf3a1Q8K4Z5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sf3a1Q8K4Z5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sf3a1Q8K4Z5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sf3a1Q8K4Z5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sf3a1Q8K4Z5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Sf3a1Q8K4Z5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sf3a1Q8K4Z5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sf3a1Q8K4Z5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Sf3a1Q8K4Z5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.47■□□□□ 0.87
Sf3a1Q8K4Z5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Sf3a1Q8K4Z5 Gm10013-201ENSMUST00000106074 672 ntBASIC20.47■□□□□ 0.87
Sf3a1Q8K4Z5 Gm26039-201ENSMUST00000158152 144 ntBASIC20.47■□□□□ 0.87
Sf3a1Q8K4Z5 Gm21559-201ENSMUST00000220638 855 ntBASIC20.47■□□□□ 0.87
Sf3a1Q8K4Z5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sf3a1Q8K4Z5 Gm8587-201ENSMUST00000076538 843 ntBASIC20.47■□□□□ 0.87
Sf3a1Q8K4Z5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sf3a1Q8K4Z5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Sf3a1Q8K4Z5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sf3a1Q8K4Z5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Sf3a1Q8K4Z5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms