Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx54Q8K4L0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx54Q8K4L0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.94■■□□□ 1.1
Ddx54Q8K4L0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx54Q8K4L0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx54Q8K4L0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx54Q8K4L0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx54Q8K4L0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC21.94■■□□□ 1.1
Ddx54Q8K4L0 Chchd1-203ENSMUST00000224633 557 ntBASIC21.94■■□□□ 1.1
Ddx54Q8K4L0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx54Q8K4L0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx54Q8K4L0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx54Q8K4L0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Ddx54Q8K4L0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx54Q8K4L0 Mir3113-201ENSMUST00000175478 76 ntBASIC21.93■■□□□ 1.1
Ddx54Q8K4L0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx54Q8K4L0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx54Q8K4L0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx54Q8K4L0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx54Q8K4L0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx54Q8K4L0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx54Q8K4L0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx54Q8K4L0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx54Q8K4L0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx54Q8K4L0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx54Q8K4L0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx54Q8K4L0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Ddx54Q8K4L0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.92■■□□□ 1.1
Ddx54Q8K4L0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.92■■□□□ 1.1
Ddx54Q8K4L0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Ddx54Q8K4L0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC21.92■■□□□ 1.1
Ddx54Q8K4L0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx54Q8K4L0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC21.92■■□□□ 1.1
Ddx54Q8K4L0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC21.92■■□□□ 1.1
Ddx54Q8K4L0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Ddx54Q8K4L0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx54Q8K4L0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx54Q8K4L0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx54Q8K4L0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Ddx54Q8K4L0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx54Q8K4L0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC21.91■■□□□ 1.1
Ddx54Q8K4L0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx54Q8K4L0 Gm14701-201ENSMUST00000117156 348 ntBASIC21.91■■□□□ 1.1
Ddx54Q8K4L0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC21.91■■□□□ 1.1
Ddx54Q8K4L0 Gm11780-201ENSMUST00000136880 516 ntBASIC21.91■■□□□ 1.1
Ddx54Q8K4L0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC21.91■■□□□ 1.1
Ddx54Q8K4L0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
Ddx54Q8K4L0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Ddx54Q8K4L0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx54Q8K4L0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx54Q8K4L0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC21.91■■□□□ 1.1
Ddx54Q8K4L0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx54Q8K4L0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Ddx54Q8K4L0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx54Q8K4L0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx54Q8K4L0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx54Q8K4L0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx54Q8K4L0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ddx54Q8K4L0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.89■■□□□ 1.09
Ddx54Q8K4L0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC21.89■■□□□ 1.09
Ddx54Q8K4L0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx54Q8K4L0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC21.89■■□□□ 1.09
Ddx54Q8K4L0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx54Q8K4L0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx54Q8K4L0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx54Q8K4L0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx54Q8K4L0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx54Q8K4L0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Ddx54Q8K4L0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx54Q8K4L0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Ddx54Q8K4L0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC21.89■■□□□ 1.09
Ddx54Q8K4L0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx54Q8K4L0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Ddx54Q8K4L0 Gm13127-201ENSMUST00000118978 1389 ntBASIC21.88■■□□□ 1.09
Ddx54Q8K4L0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC21.88■■□□□ 1.09
Ddx54Q8K4L0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx54Q8K4L0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx54Q8K4L0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
Ddx54Q8K4L0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms