Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.37■□□□□ 0.21
Alms1Q8K4E0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Alms1Q8K4E0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alms1Q8K4E0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alms1Q8K4E0 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.37■□□□□ 0.21
Alms1Q8K4E0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alms1Q8K4E0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alms1Q8K4E0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alms1Q8K4E0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Alms1Q8K4E0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alms1Q8K4E0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Alms1Q8K4E0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Alms1Q8K4E0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alms1Q8K4E0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.37■□□□□ 0.21
Alms1Q8K4E0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.37■□□□□ 0.21
Alms1Q8K4E0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alms1Q8K4E0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.37■□□□□ 0.21
Alms1Q8K4E0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alms1Q8K4E0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Mir5126-201ENSMUST00000175513 77 ntBASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alms1Q8K4E0 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.35■□□□□ 0.21
Alms1Q8K4E0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alms1Q8K4E0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Alms1Q8K4E0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alms1Q8K4E0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alms1Q8K4E0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alms1Q8K4E0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alms1Q8K4E0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alms1Q8K4E0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Alms1Q8K4E0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alms1Q8K4E0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alms1Q8K4E0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alms1Q8K4E0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Alms1Q8K4E0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Alms1Q8K4E0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.34■□□□□ 0.21
Alms1Q8K4E0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.34■□□□□ 0.21
Alms1Q8K4E0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.34■□□□□ 0.21
Alms1Q8K4E0 Auts2-212ENSMUST00000178555 309 ntBASIC16.34■□□□□ 0.21
Alms1Q8K4E0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Alms1Q8K4E0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Alms1Q8K4E0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Alms1Q8K4E0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Alms1Q8K4E0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Alms1Q8K4E0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.34■□□□□ 0.21
Alms1Q8K4E0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Alms1Q8K4E0 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.34■□□□□ 0.21
Alms1Q8K4E0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Alms1Q8K4E0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Alms1Q8K4E0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Alms1Q8K4E0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.34■□□□□ 0.21
Alms1Q8K4E0 Gm44450-201ENSMUST00000199528 114 ntBASIC16.34■□□□□ 0.21
Alms1Q8K4E0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Alms1Q8K4E0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
Alms1Q8K4E0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Alms1Q8K4E0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Alms1Q8K4E0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Alms1Q8K4E0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.33■□□□□ 0.2
Alms1Q8K4E0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alms1Q8K4E0 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.33■□□□□ 0.2
Alms1Q8K4E0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Alms1Q8K4E0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alms1Q8K4E0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Alms1Q8K4E0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alms1Q8K4E0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Alms1Q8K4E0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alms1Q8K4E0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alms1Q8K4E0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alms1Q8K4E0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alms1Q8K4E0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.32■□□□□ 0.2
Alms1Q8K4E0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Alms1Q8K4E0 Gm10052-201ENSMUST00000168019 960 ntBASIC16.32■□□□□ 0.2
Alms1Q8K4E0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Alms1Q8K4E0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Alms1Q8K4E0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.32■□□□□ 0.2
Alms1Q8K4E0 Gm7729-201ENSMUST00000050143 801 ntBASIC16.32■□□□□ 0.2
Alms1Q8K4E0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Alms1Q8K4E0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms