Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Gm43799-201ENSMUST00000201845 579 ntBASIC15.84■□□□□ 0.13
Clrn1Q8K445 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Clrn1Q8K445 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Clrn1Q8K445 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.13
Clrn1Q8K445 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Clrn1Q8K445 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Clrn1Q8K445 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Clrn1Q8K445 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clrn1Q8K445 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clrn1Q8K445 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Clrn1Q8K445 Gm13559-201ENSMUST00000120476 863 ntBASIC15.83■□□□□ 0.12
Clrn1Q8K445 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Clrn1Q8K445 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Clrn1Q8K445 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clrn1Q8K445 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Clrn1Q8K445 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Clrn1Q8K445 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.82■□□□□ 0.12
Clrn1Q8K445 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn1Q8K445 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clrn1Q8K445 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Clrn1Q8K445 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.81■□□□□ 0.12
Clrn1Q8K445 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clrn1Q8K445 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn1Q8K445 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.8■□□□□ 0.12
Clrn1Q8K445 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Clrn1Q8K445 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Clrn1Q8K445 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn1Q8K445 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.8■□□□□ 0.12
Clrn1Q8K445 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn1Q8K445 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn1Q8K445 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Clrn1Q8K445 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn1Q8K445 Gm7889-201ENSMUST00000185591 958 ntBASIC15.8■□□□□ 0.12
Clrn1Q8K445 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.8■□□□□ 0.12
Clrn1Q8K445 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn1Q8K445 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Clrn1Q8K445 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clrn1Q8K445 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms