Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 Gm7791-201ENSMUST00000219066 539 ntBASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cchcr1Q8K2I2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cchcr1Q8K2I2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cchcr1Q8K2I2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cchcr1Q8K2I2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Cchcr1Q8K2I2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cchcr1Q8K2I2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cchcr1Q8K2I2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cchcr1Q8K2I2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cchcr1Q8K2I2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cchcr1Q8K2I2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cchcr1Q8K2I2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cchcr1Q8K2I2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cchcr1Q8K2I2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Gm715-201ENSMUST00000117865 831 ntBASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cchcr1Q8K2I2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cchcr1Q8K2I2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cchcr1Q8K2I2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms