Protein–RNA interactions for Protein: Q8K0W3

Rnf208, RING finger protein 208, mousemouse

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf208Q8K0W3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf208Q8K0W3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf208Q8K0W3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Gm11780-201ENSMUST00000136880 516 ntBASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Mir3113-201ENSMUST00000175478 76 ntBASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rnf208Q8K0W3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf208Q8K0W3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf208Q8K0W3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf208Q8K0W3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rnf208Q8K0W3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.34■□□□□ 0.53
Rnf208Q8K0W3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf208Q8K0W3 Chchd1-203ENSMUST00000224633 557 ntBASIC18.34■□□□□ 0.53
Rnf208Q8K0W3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf208Q8K0W3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf208Q8K0W3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf208Q8K0W3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf208Q8K0W3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf208Q8K0W3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf208Q8K0W3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf208Q8K0W3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf208Q8K0W3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf208Q8K0W3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf208Q8K0W3 Gm7222-201ENSMUST00000117512 906 ntBASIC18.33■□□□□ 0.52
Rnf208Q8K0W3 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.33■□□□□ 0.52
Rnf208Q8K0W3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.33■□□□□ 0.52
Rnf208Q8K0W3 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.33■□□□□ 0.52
Rnf208Q8K0W3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.33■□□□□ 0.52
Rnf208Q8K0W3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf208Q8K0W3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.33■□□□□ 0.52
Rnf208Q8K0W3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf208Q8K0W3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf208Q8K0W3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.33■□□□□ 0.52
Rnf208Q8K0W3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf208Q8K0W3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf208Q8K0W3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf208Q8K0W3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf208Q8K0W3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf208Q8K0W3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf208Q8K0W3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.32■□□□□ 0.52
Rnf208Q8K0W3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf208Q8K0W3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.32■□□□□ 0.52
Rnf208Q8K0W3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf208Q8K0W3 Gm4459-201ENSMUST00000118750 468 ntBASIC18.32■□□□□ 0.52
Rnf208Q8K0W3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf208Q8K0W3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rnf208Q8K0W3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf208Q8K0W3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms