Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clip4Q8CI96 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clip4Q8CI96 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Clip4Q8CI96 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.91■□□□□ 0.3
Clip4Q8CI96 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clip4Q8CI96 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clip4Q8CI96 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clip4Q8CI96 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.91■□□□□ 0.3
Clip4Q8CI96 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clip4Q8CI96 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.91■□□□□ 0.3
Clip4Q8CI96 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Clip4Q8CI96 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clip4Q8CI96 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clip4Q8CI96 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clip4Q8CI96 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clip4Q8CI96 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clip4Q8CI96 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clip4Q8CI96 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clip4Q8CI96 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clip4Q8CI96 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Clip4Q8CI96 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clip4Q8CI96 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clip4Q8CI96 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clip4Q8CI96 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
Clip4Q8CI96 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Clip4Q8CI96 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Clip4Q8CI96 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Clip4Q8CI96 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Clip4Q8CI96 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Gm38027-201ENSMUST00000192315 235 ntBASIC16.89■□□□□ 0.29
Clip4Q8CI96 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Gm43799-201ENSMUST00000201845 579 ntBASIC16.89■□□□□ 0.29
Clip4Q8CI96 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Clip4Q8CI96 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.88■□□□□ 0.29
Clip4Q8CI96 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.88■□□□□ 0.29
Clip4Q8CI96 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clip4Q8CI96 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.87■□□□□ 0.29
Clip4Q8CI96 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clip4Q8CI96 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms