Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.34■□□□□ 0.53
Sox30Q8CGW4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sox30Q8CGW4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.33■□□□□ 0.53
Sox30Q8CGW4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sox30Q8CGW4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sox30Q8CGW4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.33■□□□□ 0.53
Sox30Q8CGW4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.33■□□□□ 0.53
Sox30Q8CGW4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Sox30Q8CGW4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox30Q8CGW4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox30Q8CGW4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox30Q8CGW4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox30Q8CGW4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox30Q8CGW4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox30Q8CGW4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Sox30Q8CGW4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sox30Q8CGW4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox30Q8CGW4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Sox30Q8CGW4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox30Q8CGW4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.32■□□□□ 0.52
Sox30Q8CGW4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sox30Q8CGW4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sox30Q8CGW4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Gm12085-201ENSMUST00000119263 940 ntBASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox30Q8CGW4 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.3■□□□□ 0.52
Sox30Q8CGW4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms