Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rp1l1Q8CGM2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rp1l1Q8CGM2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rp1l1Q8CGM2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.38■□□□□ 0.37
Rp1l1Q8CGM2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rp1l1Q8CGM2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rp1l1Q8CGM2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.38■□□□□ 0.37
Rp1l1Q8CGM2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rp1l1Q8CGM2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rp1l1Q8CGM2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.38■□□□□ 0.37
Rp1l1Q8CGM2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rp1l1Q8CGM2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rp1l1Q8CGM2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rp1l1Q8CGM2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rp1l1Q8CGM2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rp1l1Q8CGM2 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.38■□□□□ 0.37
Rp1l1Q8CGM2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Gm25406-201ENSMUST00000157599 105 ntBASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rp1l1Q8CGM2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rp1l1Q8CGM2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rp1l1Q8CGM2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rp1l1Q8CGM2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rp1l1Q8CGM2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rp1l1Q8CGM2 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.36■□□□□ 0.37
Rp1l1Q8CGM2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rp1l1Q8CGM2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rp1l1Q8CGM2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rp1l1Q8CGM2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Gm26308-201ENSMUST00000157768 69 ntBASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.35■□□□□ 0.37
Rp1l1Q8CGM2 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.34■□□□□ 0.37
Rp1l1Q8CGM2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rp1l1Q8CGM2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rp1l1Q8CGM2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.34■□□□□ 0.37
Rp1l1Q8CGM2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.34■□□□□ 0.37
Rp1l1Q8CGM2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rp1l1Q8CGM2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.34■□□□□ 0.37
Rp1l1Q8CGM2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rp1l1Q8CGM2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.34■□□□□ 0.37
Rp1l1Q8CGM2 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.34■□□□□ 0.37
Rp1l1Q8CGM2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.34■□□□□ 0.37
Rp1l1Q8CGM2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.34■□□□□ 0.37
Rp1l1Q8CGM2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.34■□□□□ 0.37
Rp1l1Q8CGM2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rp1l1Q8CGM2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rp1l1Q8CGM2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rp1l1Q8CGM2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.33■□□□□ 0.37
Rp1l1Q8CGM2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.33■□□□□ 0.37
Rp1l1Q8CGM2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Rp1l1Q8CGM2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.33■□□□□ 0.37
Rp1l1Q8CGM2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rp1l1Q8CGM2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rp1l1Q8CGM2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rp1l1Q8CGM2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rp1l1Q8CGM2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rp1l1Q8CGM2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rp1l1Q8CGM2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rp1l1Q8CGM2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms