Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.19■□□□□ 0.66
Smc2Q8CG48 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Smc2Q8CG48 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc2Q8CG48 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Smc2Q8CG48 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc2Q8CG48 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc2Q8CG48 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc2Q8CG48 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc2Q8CG48 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Smc2Q8CG48 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc2Q8CG48 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.18■□□□□ 0.66
Smc2Q8CG48 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smc2Q8CG48 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc2Q8CG48 Gm27463-201ENSMUST00000183569 57 ntBASIC19.18■□□□□ 0.66
Smc2Q8CG48 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.18■□□□□ 0.66
Smc2Q8CG48 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.18■□□□□ 0.66
Smc2Q8CG48 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc2Q8CG48 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc2Q8CG48 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smc2Q8CG48 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc2Q8CG48 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc2Q8CG48 Haglr-201ENSMUST00000100000 2085 ntBASIC19.18■□□□□ 0.66
Smc2Q8CG48 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smc2Q8CG48 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc2Q8CG48 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc2Q8CG48 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.17■□□□□ 0.66
Smc2Q8CG48 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Mir5122-201ENSMUST00000175004 89 ntBASIC19.17■□□□□ 0.66
Smc2Q8CG48 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.17■□□□□ 0.66
Smc2Q8CG48 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.17■□□□□ 0.66
Smc2Q8CG48 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc2Q8CG48 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smc2Q8CG48 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc2Q8CG48 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smc2Q8CG48 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms