Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smc4Q8CG47 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.67■□□□□ 0.9
Smc4Q8CG47 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc4Q8CG47 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc4Q8CG47 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Smc4Q8CG47 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc4Q8CG47 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc4Q8CG47 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc4Q8CG47 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc4Q8CG47 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc4Q8CG47 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Smc4Q8CG47 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Smc4Q8CG47 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc4Q8CG47 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Smc4Q8CG47 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc4Q8CG47 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smc4Q8CG47 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc4Q8CG47 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc4Q8CG47 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.65■□□□□ 0.9
Smc4Q8CG47 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smc4Q8CG47 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.65■□□□□ 0.9
Smc4Q8CG47 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.65■□□□□ 0.9
Smc4Q8CG47 Gm18421-201ENSMUST00000204122 625 ntBASIC20.65■□□□□ 0.9
Smc4Q8CG47 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.65■□□□□ 0.9
Smc4Q8CG47 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.65■□□□□ 0.9
Smc4Q8CG47 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Smc4Q8CG47 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Smc4Q8CG47 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.65■□□□□ 0.9
Smc4Q8CG47 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc4Q8CG47 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc4Q8CG47 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc4Q8CG47 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Smc4Q8CG47 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc4Q8CG47 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Smc4Q8CG47 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc4Q8CG47 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.64■□□□□ 0.89
Smc4Q8CG47 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc4Q8CG47 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc4Q8CG47 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.64■□□□□ 0.89
Smc4Q8CG47 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc4Q8CG47 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc4Q8CG47 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc4Q8CG47 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.63■□□□□ 0.89
Smc4Q8CG47 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc4Q8CG47 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.62■□□□□ 0.89
Smc4Q8CG47 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Smc4Q8CG47 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.62■□□□□ 0.89
Smc4Q8CG47 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc4Q8CG47 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc4Q8CG47 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.62■□□□□ 0.89
Smc4Q8CG47 Gm18669-201ENSMUST00000216049 778 ntBASIC20.62■□□□□ 0.89
Smc4Q8CG47 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smc4Q8CG47 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.62■□□□□ 0.89
Smc4Q8CG47 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc4Q8CG47 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc4Q8CG47 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc4Q8CG47 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc4Q8CG47 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Smc4Q8CG47 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc4Q8CG47 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Smc4Q8CG47 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc4Q8CG47 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc4Q8CG47 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.61■□□□□ 0.89
Smc4Q8CG47 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc4Q8CG47 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms